James L. Funderburgh, Ph.D.
Associate Professor
Primary Appointment: Ophthalmology
Tel: 412-647-3853
Fax: 412-647-5880
jlfunder@pitt.edu
PubMed pub. listing
Funderburgh Webpage
CBP Research Group(s):
CBMP Grad. Program Group: Cellular Injury and Wound Healing

Research Interest

Keratocytes are the cells of the corneal stroma which are responsible for secretion and maintenance of the strong transparent connective tissue of the cornea. In response to bacterial or viral infections, inflammation or injury, keratocytes secrete fibrotic scar tissue that scatters incident light and reduces vision for millions of individuals worldwide. Our lab is using cultured corneal cells to investigate the biology of the wound healing response. We have identified three distinct phenotypes of cultured cells that represent the quiescent keratocytes of the normal cornea, the motile fibroblasts, that repopulate healing wounds, and myofibroblasts that secrete opaque scar tissue. Each of these cell types can be generated by mitogens in cell culture. Each has a gene expression profile that exhibits characteristic molecular markers for the phenotype. One set of molecules that are markedly modified during the healing process healing are proteoglycans, large extracellular matrix components that are essential for transparent corneal tissue. A currently NIH funded project in our lab is aimed at identifying the genes involved in biosynthesis of the proteoglycans, specifically the transferases that add carbohydrates and sulfate to the high molecular weight carbohydrates of the proteoglycans We are characterizing transcription and promoter functions of these genes and examining gene function in cultured cells by manipulation gene expression using overexpression, dominant negative, and interference RNA technology. Biological roles of these genes are being examined in vivo by manipulating expression in transgenic mice.

In a second project we are committed to development of a bioprosthetic cornea. Cornea is one of the most successfully transplanted organs however predictions show that need for corneal transplants will soon outpace donor tissue. Fully synthetic non-biologic corneas are under development but currently the synthetic materials do not integrate well into the ocular environment. Corneal cells in culture show many characteristics of corneal cells in vivo, but these cultures do not secrete enough extracellular matrix to produce the transparent and strong tissue required for a functional cornea. Our lab is investigating the hypothesis that keratocytes embedded in a three dimensional scaffolding surrounded by the other cellular components of cornea will generate connective tissue similar to that made in vivo. For scaffolding we are using synthetic hydrogels generated from hydrolysable polymers and acellular tissue matrix from animal corneas. Simultaneously we are developing a source for cells in these assemblies by examining means of expanding cultured corneal cells and means of adapting stem cells to assume corneal phenotypes.

Publications
  1. Funderburgh ML, Du Y, Mann MM, SundarRaj N, Funderburgh JL Cloning and Propagation of Repli-cative Progenitor Cells from the Corneal Stroma Submitted to FASEB Journal, September 2004
  2. Multipotent Stem Cells in Human Corneal Stroma. Yiqin Du, Martha L Funderburgh, Mary M Mann, Nirmala SundarRaj, James L Funderburgh. Submitted to Stem Cells, Sept 2004.
  3. Carlson EC, Mamiya K, Liu CY, Gendron RL, Birk DE, Funderburgh JL, Kao WW. Role of 41Cys in the N-terminal domain of lumican in ex vivo collagen fibrillogenesis by cultured corneal stromal cells. Biochem J. 2003 369(Pt 3):461-8.
  4. Du, Y, Chen J, Funderburgh JL, Zhu X, Li L. Functional Reconstruction of Rabbit Corneal Epithelium by Human Limbal Cells Cultured on Amniotic Membrane. Molecular Vision. 2003 9:635-43.
  5. Funderburgh, J.L., Mann, M.M., SundarRaj, N., Funderburgh, M.L. Keratocyte Phenotype Mediates Proteoglycan Structure: A Role for Fibroblasts in Corneal Fibrosis. J Biol Chem 2003 278, 45629-45637
  6. Hayashi Y, C-Y Liu, JV Jester, MHayashi, I-J Wang, JL Funderburgh, S Saika, PJ Roughley, CW-C Kao and W W-Y Kao Excess Biglycan Interferes with TGF-Alpha Signaling Required for Eyelid Morphogenesis. in press in Developmental Biology
  7. Funderburgh, J. L. Keratan Sulfate Biosynthesis. IUBMB Life 2002. 54:187-194,.
  8. Funderburgh, J.L., M.L. Funderburgh, M.M. Mann, L. Corpuz, and M.R. Roth, Proteoglycan expression during transforming growth factor beta -induced keratocyte-myofibroblast transdifferentiation. J Biol Chem, 2001. 276(47): p. 44173-8.
  9. Funderburgh JL. (2000) “Corneal Proteoglycans” in Proteoglycans: Structure, Biology and Molecular Inter-actions, R. Iozzo, ed., Marcel Dekker Inc., N.Y.
  10. Funderburgh JL. Biosynthesis of Proteoglycans with Keratan Sulfate. (2000) In Oligosaccharides in Chem-istry and Biology: A Comprehensive Handbook. Volume II: Biology of Saccharides. Eds. Ernst B., Hart. G. and Sinay. P. publisher. Wiley-VCH Verlag GmbH, Geinheim.
  11. Funderburgh, J.L., Keratan sulfate: structure, biosynthesis, and function. Glycobiology, 2000. 10(10): p. 951-8.
  12. Long, C.J., M.R. Roth, E.S. Tasheva, M. Funderburgh, R. Smit, G.W. Conrad, and J.L. Funderburgh, Fibroblast growth factor-2 promotes keratan sulfate proteoglycan expression by keratocytes in vitro. J Biol Chem, 2000. 275(18): p. 13918-23.
  13. Saika, S., A. Shiraishi, C.Y. Liu, J.L. Funderburgh, C.W. Kao, R.L. Converse, and W.W. Kao, Role of lumican in the corneal epithelium during wound healing. J Biol Chem, 2000. 275(4): p. 2607-12.
  14. Swiergiel, J.J., J.L. Funderburgh, M.J. Justice, and G.W. Conrad, Developmental eye and neural tube defects in the eye blebs mouse. Dev Dyn, 2000. 219(1): p. 21-7.
  15. Beales, M.P., J.L. Funderburgh, J.V. Jester, and J.R. Hassell, Proteoglycan synthesis by bovine kerato-cytes and corneal fibroblasts: maintenance of the keratocyte phenotype in culture. Invest Ophthalmol Vis Sci, 1999. 40(8): p. 1658-63.
  16. Tasheva, E.S., J.L. Funderburgh, M.L. Funderburgh, L.M. Corpuz, and G.W. Conrad, Structure and se-quence of the gene encoding human keratocan. DNA Seq, 1999. 10(1): p. 67-74.
  17. Tasheva, E.S., M.L. Funderburgh, J. McReynolds, J.L. Funderburgh, and G.W. Conrad, The bovine mimecan gene. Molecular cloning and characterization of two major RNA transcripts generated by al-ternative use of two splice acceptor sites in the third exon. J Biol Chem, 1999. 274(26): p. 18693-701.
  18. Funderburgh, J.L., A.L. Perchellet, J. Swiergiel, G.W. Conrad, and M.J. Justice, Keratocan (Kera), a corneal keratan sulfate proteoglycan, maps to the distal end of mouse chromosome 10. Genomics, 1998. 52(1): p. 110-1.
  19. Funderburgh, J.L., N.D. Hevelone, M.R. Roth, M.L. Funderburgh, M.R. Rodrigues, V.S. Nirankari, and G.W. Conrad, Decorin and biglycan of normal and pathologic human corneas. Invest Ophthalmol Vis Sci, 1998. 39(10): p. 1957-64.
  20. Liu, C.Y., A. Shiraishi, C.W. Kao, R.L. Converse, J.L. Funderburgh, L.M. Corpuz, G.W. Conrad, and W.W. Kao, The cloning of mouse keratocan cDNA and genomic DNA and the characterization of its expression during eye development. J Biol Chem, 1998. 273(35): p. 22584-8.
  21. Tasheva, E.S., J.L. Funderburgh, L.M. Corpuz, and G.W. Conrad, Cloning, characterization and tissue-specific expression of the gene encoding bovine keratocan, a corneal keratan sulfate proteoglycan. Gene, 1998. 218(1-2): p. 63-8.
  22. Funderburgh, J.L., L.M. Corpuz, M.R. Roth, M.L. Funderburgh, E.S. Tasheva, and G.W. Conrad, Mime-can, the 25-kDa corneal keratan sulfate proteoglycan, is a product of the gene producing osteoglycin. J Biol Chem, 1997. 272(44): p. 28089-95.
  23. Funderburgh, J.L., R.R. Mitschler, M.L. Funderburgh, M.R. Roth, S.K. Chapes, and G.W. Conrad, Macrophage receptors for lumican. A corneal keratan sulfate proteoglycan. Invest Ophthalmol Vis Sci, 1997. 38(6): p. 1159-67.
  24. Tasheva, E.S., L.M. Corpuz, J.L. Funderburgh, and G.W. Conrad, Differential splicing and alternative polyadenylation generate multiple mimecan mRNA transcripts. J Biol Chem, 1997. 272(51): p. 32551-6.
  25. Ying, S., A. Shiraishi, C.W. Kao, R.L. Converse, J.L. Funderburgh, J. Swiergiel, M.R. Roth, G.W. Con-rad, and W.W. Kao, Characterization and expression of the mouse lumican gene. J Biol Chem, 1997. 272(48): p. 30306-13.
  26. Corpuz, L.M., J.L. Funderburgh, M.L. Funderburgh, G.S. Bottomley, S. Prakash, and G.W. Conrad, Mo-lecular cloning and tissue distribution of keratocan. Bovine corneal keratan sulfate proteoglycan 37A. J Biol Chem, 1996. 271(16): p. 9759-63.
  27. Funderburgh, J.L. and S. Prakash, SDS-polyacrylamide gel electrophoretic analysis of proteins in the presence of guanidinium hydrochloride. Biotechniques, 1996. 20(3): p. 376-8.
  28. Funderburgh, J.L., M.L. Funderburgh, M.M. Mann, S. Prakash, and G.W. Conrad, Synthesis of corneal keratan sulfate proteoglycans by bovine keratocytes in vitro. J Biol Chem, 1996. 271(49): p. 31431-6.
  29. Funderburgh, J.L., M.L. Funderburgh, N.D. Hevelone, M.E. Stech, M.J. Justice, C.Y. Liu, W.W. Kao, and G.W. Conrad, Sequence, molecular properties, and chromosomal mapping of mouse lumican. In-vest Ophthalmol Vis Sci, 1995. 36(11): p. 2296-303.
  30. Conrad, G.W., C.A. Luer, A.Q. Paulsen, and J.L. Funderburgh, Preliminary observations on the effects of selenate on the development of the embryonic skate, Raja eglanteria. Trans Kans Acad Sci, 1993. 96(1-2): p. 62-8.
  31. Funderburgh, J.L., M.L. Funderburgh, S.J. Brown, J.P. Vergnes, J.R. Hassell, M.M. Mann, and G.W. Conrad, Sequence and structural implications of a bovine corneal keratan sulfate proteoglycan core pro-tein. Protein 37B represents bovine lumican and proteins 37A and 25 are unique. J Biol Chem, 1993. 268(16): p. 11874-80.
  32. Conrad GW and Funderburgh JL. (1992) Eye Development and the Appearance and Maintenance of Cor-neal Transparency. Transactions of the Kansas Academy of Sciences 95:34-40.
  33. Rodrigues, M., V. Nirankari, S. Rajagopalan, K. Jones, and J. Funderburgh, Clinical and histopathologic changes in the host cornea after epikeratoplasty for keratoconus. Am J Ophthalmol, 1992. 114(2): p. 161-70.
  34. Funderburgh JL, Funderburgh ML, Mann MM, and Conrad GW. (1991) Physical and Biological Properties of Keratan Sulfate Proteoglycan. Transactions of the Biochemical Society 19, 871-876.
  35. Funderburgh, J.L., M.L. Funderburgh, M.M. Mann, and G.W. Conrad, Arterial lumican. Properties of a corneal-type keratan sulfate proteoglycan from bovine aorta. J Biol Chem, 1991. 266(36): p. 24773-7.
  36. Funderburgh, J.L., M.L. Funderburgh, M.M. Mann, and G.W. Conrad, Unique glycosylation of three keratan sulfate proteoglycan isoforms. J Biol Chem, 1991. 266(22): p. 14226-31.
  37. Jost, C.J., J.L. Funderburgh, M. Mann, J.R. Hassell, and G.W. Conrad, Cell-free translation and charac-terization of corneal keratan sulfate proteoglycan core proteins. J Biol Chem, 1991. 266(20): p. 13336-41.
  38. Funderburgh, J.L. and G.W. Conrad, Isoforms of corneal keratan sulfate proteoglycan. J Biol Chem, 1990. 265(14): p. 8297-303.
  39. Funderburgh, J.L., M.L. Funderburgh, M.M. Rodrigues, J.H. Krachmer, and G.W. Conrad, Altered anti-genicity of keratan sulfate proteoglycan in selected corneal diseases. Invest Ophthalmol Vis Sci, 1990. 31(3): p. 419-28.
  40. Funderburgh JL and Conrad GW (1989) Detection and Purification of Corneal Keratan Sulfate Proteoglycan from Non-corneal Tissues. In: "Keratan Sulphate. Chemistry, Biology, Chemical Pathology" J Scott and H Greiling, eds. The Biochemical Society, London., pp 39-48.
  41. Funderburgh, J.L. and J.W. Chandler, Proteoglycans of rabbit corneas with nonperforating wounds. In-vest Ophthalmol Vis Sci, 1989. 30(3): p. 435-42.
  42. Funderburgh, J.L., N. Panjwani, G.W. Conrad, and J. Baum, Altered keratan sulfate epitopes in kerato-conus. Invest Ophthalmol Vis Sci, 1989. 30(10): p. 2278-81.
  43. Funderburgh, J.L., C. Cintron, H.I. Covington, and G.W. Conrad, Immunoanalysis of keratan sulfate proteoglycan from corneal scars. Invest Ophthalmol Vis Sci, 1988. 29(7): p. 1116-24.
  44. Funderburgh, J.L., B. Caterson, and G.W. Conrad, Distribution of proteoglycans antigenically related to corneal keratan sulfate proteoglycan. J Biol Chem, 1987. 262(24): p. 11634-40.
  45. Funderburgh, J.L., B. Caterson, and G.W. Conrad, Keratan sulfate proteoglycan during embryonic de-velopment of the chicken cornea. Dev Biol, 1986. 116(2): p. 267-77.
  46. Funderburgh, M.L., J.L. Funderburgh, and J.W. Chandler, Thymidine kinase activity of ocular herpes simplex isolates resistant to IUDR therapy. Invest Ophthalmol Vis Sci, 1986. 27(10): p. 1546-8.
  47. Funderburgh, J.L., P.R. Stenzel-Johnson, and J.W. Chandler, Corneal glycosaminoglycan synthesis in long-term organ culture. Invest Ophthalmol Vis Sci, 1983. 24(2): p. 208-13.
  48. Funderburgh, J.L., P.R. Stenzel-Johnson, and J.W. Chandler, Monoclonal antibodies to rabbit corneal keratan sulfate proteoglycan. Curr Eye Res, 1982. 2(11): p. 769-76.
  49. Funderburgh, J.L. and J.W. Chandler, An agarose gel electrophoretic method for analysis of sulfated glycosaminoglycans of cultured cells. Anal Biochem, 1978. 91(2): p. 464-72.